Automated Extraction of Chemical Information from the Scientific Literature7 December 2016Slides for a talk I gave at the Cambridge Cheminformatics Network meeting.
Chemical Structure Handling in MongoDB4 December 2014Slides for a talk I gave at the Cambridge Cheminformatics Network meeting.
Chemical Similarity Search in MongoDB3 June 2014How to implement chemical similarity search in MongoDB along with some performance benchmarks.
Simple Versioned Backups for MongoDB22 November 2012A python script for snapshot backups of a MongoDB database.
Extract XMP metadata from PDFs in Python22 June 2012A lightweight XMP parser for extracting PDF metadata in Python.
CIRpy: A Python Interface for the NCI Chemical Identifier Resolver20 March 2012Resolve identifiers to various chemical formats in Python.